Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative lipoprotein | SAMEA3472108_03175 | Not Available | Positive | 3284490 - 3285314 | 30074.1 |
| copper homeostasis protein (lipoprotein nlpe) | SAMEA3472108_03176 | Not Available | Negative | 3285514 - 3286224 | 25913.7 |
| putative peptidyl-trna hydrolase | SAMEA3472108_03177 | Not Available | Negative | 3286238 - 3286660 | 15577.9 |
| yaeq family protein | SAMEA3472108_03178 | Not Available | Negative | 3286657 - 3287202 | 20877.7 |
| putative cytoplasmic protein | SAMEA3472108_03179 | Not Available | Positive | 3287368 - 3287568 | 7214.59 |
| rho-binding antiterminator | SAMEA3472108_03180 | Not Available | Positive | 3287555 - 3287815 | 9698.45 |
| trna(ile)-lysidine synthetase | SAMEA3472108_03181 | Not Available | Negative | 3287868 - 3289163 | 47906.6 |
| glyoxylase i family protein | SAMEA3472108_03182 | Not Available | Negative | 3289228 - 3289617 | 14707.4 |
| lysine decarboxylase, constitutive | SAMEA3472108_03183 | Not Available | Negative | 3289674 - 3291815 | 80416.7 |
| acetyl-coa carboxylase | SAMEA3472108_03184 | Not Available | Negative | 3291914 - 3292873 | 35243.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





