Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p) transhydrogenase subunit alpha | SAMEA3472108_03113 | Not Available | Positive | 3233209 - 3234741 | 54606.6 |
| nad(p) transhydrogenase subunit beta | SAMEA3472108_03114 | Not Available | Positive | 3234752 - 3236140 | 48726.0 |
| transporter | SAMEA3472108_03115 | Not Available | Negative | 3236165 - 3237199 | 37545.3 |
| multidrug resistance protein | SAMEA3472108_03116 | Not Available | Positive | 3237611 - 3237976 | 13101.6 |
| multidrug resistance protein | SAMEA3472108_03117 | Not Available | Positive | 3237963 - 3238292 | 11720.8 |
| putative protease | SAMEA3472108_03118 | Not Available | Negative | 3238331 - 3239152 | 29250.6 |
| acid shock protein | SAMEA3472108_03119 | Not Available | Negative | 3239428 - 3239736 | 10561.7 |
| major facilitator superfamily protein | SAMEA3472108_03120 | Not Available | Negative | 3240160 - 3241413 | 45216.2 |
| lysr family transcriptional regulator | SAMEA3472108_03121 | Not Available | Positive | 3241520 - 3242413 | 33311.4 |
| protein mlc (making large colonies protein) | SAMEA3472108_03122 | Not Available | Positive | 3242548 - 3243768 | 44292.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





