Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative aldehyde ferredoxin oxidoreductase | SAMEA3472108_03041 | Not Available | Positive | 3157360 - 3159462 | 77880.8 |
| putative oxidoreductase subunit | SAMEA3472108_03042 | Not Available | Positive | 3159475 - 3159936 | 17442.7 |
| putative oxidoreductase fe-s subunit | SAMEA3472108_03043 | Not Available | Positive | 3160177 - 3160845 | 25094.9 |
| putative oxidoreductase, cytochrome b subunit | SAMEA3472108_03044 | Not Available | Positive | 3160842 - 3161627 | 29556.4 |
| putative oxidoreductase subunit | SAMEA3472108_03045 | Not Available | Positive | 3161679 - 3162443 | 27488.0 |
| conserved protein with fad/nad(p)-binding domain | SAMEA3472108_03046 | Not Available | Negative | 3162455 - 3164059 | 60729.5 |
| Trna-val | Not Available | Not Available | Positive | 3164598 - 3164674 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 3164679 - 3164755 | Not Available |
| fluffing protein | SAMEA3472108_03050 | Not Available | Positive | 3165063 - 3166319 | 42858.7 |
| multidrug resistance protein | SAMEA3472108_03051 | Not Available | Negative | 3166360 - 3167733 | 49468.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





