Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanyl-trna synthetase subunit beta | SAMEA3472108_02998 | Not Available | Positive | 3113242 - 3115629 | 87410.2 |
| vitamin b12 abc transporter, permease protein | SAMEA3472108_03000 | Not Available | Positive | 3116034 - 3117014 | 34909.4 |
| vitamin b12 transport periplasmic protein (putative glutathione peroxidase) | SAMEA3472108_03001 | Not Available | Positive | 3117077 - 3117628 | 20395.5 |
| vitamin b12 abc transporter, atp-binding protein | SAMEA3472108_03002 | Not Available | Positive | 3117628 - 3118377 | 27113.0 |
| putative lipoprotein | SAMEA3472108_03003 | Not Available | Positive | 3118455 - 3118919 | 17318.7 |
| putative diguanylate phosphodiesterase | SAMEA3472108_03004 | Not Available | Positive | 3119166 - 3119879 | 26994.7 |
| putative cytoplasmic protein ydiu | SAMEA3472108_03005 | Not Available | Positive | 3119942 - 3121378 | 54446.2 |
| putative cytoplasmic protein | SAMEA3472108_03006 | Not Available | Negative | 3121382 - 3121573 | 7117.58 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | SAMEA3472108_03007 | Not Available | Negative | 3121705 - 3122751 | 38737.3 |
| pep synthetase regulatory protein | SAMEA3472108_03008 | Not Available | Negative | 3122908 - 3123741 | 31212.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





