Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Host-nuclease inhibitor protein gam | SAMEA3472108_02681 | Not Available | Positive | 2792508 - 2792807 | 11654.6 |
| Recombinational dna repair protein rect | SAMEA3472108_02682 | Not Available | Positive | 2792813 - 2793598 | 29659.4 |
| Exonuclease | SAMEA3472108_02683 | Not Available | Positive | 2793595 - 2794275 | 25901.0 |
| gydac | SAMEA3472108_02684 | Not Available | Positive | 2794495 - 2794683 | 7145.63 |
| Hypothetical protein | SAMEA3472108_02685 | Not Available | Positive | 2794783 - 2794998 | 8456.25 |
| Putative integrase | SAMEA3472108_02686 | Not Available | Positive | 2795000 - 2796235 | 47589.8 |
| c32 trna thiolase | SAMEA3472108_02687 | Not Available | Positive | 2796287 - 2797222 | 35517.9 |
| Superfamily ii dna/rna helicase | SAMEA3472108_02688 | Not Available | Negative | 2797351 - 2798724 | 49218.7 |
| Attr | Not Available | Not Available | Positive | 2808990 - 2809002 | Not Available |
| Attl | Not Available | Not Available | Positive | 3250538 - 3250550 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





