Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein | SAMEA3472108_02987 | Not Available | Negative | 3103496 - 3103786 | 10883.7 |
| 6-phosphofructokinase | SAMEA3472108_02988 | Not Available | Negative | 3103887 - 3104816 | 32457.9 |
| putative outer membrane protein, acid-inducible | SAMEA3472108_02989 | Not Available | Positive | 3105103 - 3105861 | 27599.6 |
| putative transmembrane anchor protein | SAMEA3472108_02990 | Not Available | Negative | 3105914 - 3106021 | 4115.44 |
| putative type iii effector protein (ankyrin repeat protein b) | SAMEA3472108_02991 | Not Available | Negative | 3106196 - 3108094 | 70860.1 |
| threonine trna synthetase | SAMEA3472108_02992 | Not Available | Positive | 3108617 - 3110545 | 74018.4 |
| translation initiation factor if-3 | SAMEA3472108_02993 | Not Available | Positive | 3110657 - 3111091 | 16638.4 |
| 50s ribosomal subunit protein l35 | SAMEA3472108_02994 | Not Available | Positive | 3111188 - 3111385 | 7289.38 |
| 50s ribosomal protein l20 | SAMEA3472108_02995 | Not Available | Positive | 3111438 - 3111794 | 13497.7 |
| phenylalanyl-trna synthetase subunit alpha | SAMEA3472108_02997 | Not Available | Positive | 3112244 - 3113227 | 36803.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





