Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative zinc-binding dehydrogenase | SAMEA3472108_02937 | Not Available | Positive | 3052567 - 3053610 | 37703.0 |
| putative sugar-bisphosphate aldolase | SAMEA3472108_02938 | Not Available | Positive | 3053631 - 3054467 | 30830.5 |
| sugar kinase | SAMEA3472108_02939 | Not Available | Positive | 3054472 - 3055419 | 34152.2 |
| putative sugar reductase | SAMEA3472108_02940 | Not Available | Positive | 3055429 - 3056409 | 36389.0 |
| deor-family transcriptional regulator | SAMEA3472108_02941 | Not Available | Positive | 3056546 - 3057304 | 28252.0 |
| metabolite transport protein | SAMEA3472108_02942 | Not Available | Positive | 3057422 - 3058780 | 50292.9 |
| nicotinamidase/pyrazinamidase | SAMEA3472108_02943 | Not Available | Negative | 3058873 - 3059514 | 23384.3 |
| l-asparaginase i | SAMEA3472108_02944 | Not Available | Negative | 3059525 - 3060541 | 37129.5 |
| signal peptide peptidase sppa, 67k type | SAMEA3472108_02945 | Not Available | Negative | 3060695 - 3062551 | 67234.9 |
| putative nitroreductase | SAMEA3472108_02946 | Not Available | Positive | 3062712 - 3063263 | 20060.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





