Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative cytoplasmic protein | SAMEA3472108_02927 | Not Available | Negative | 3041160 - 3042443 | 49453.2 |
| serine kinase family protein | SAMEA3472108_02928 | Not Available | Negative | 3042556 - 3044490 | 74484.3 |
| mlta-interacting protein | SAMEA3472108_02929 | Not Available | Positive | 3044926 - 3045672 | 27832.4 |
| putative aldo/keto reductase | SAMEA3472108_02930 | Not Available | Positive | 3045762 - 3046616 | 30921.3 |
| putative aldose 1-epimerase | SAMEA3472108_02931 | Not Available | Negative | 3046667 - 3047551 | 32702.8 |
| glyceraldehyde 3-phosphate dehydrogenase a | SAMEA3472108_02932 | Not Available | Negative | 3047635 - 3048630 | 35534.5 |
| methionine sulfoxide reductase b | SAMEA3472108_02933 | Not Available | Positive | 3048972 - 3049385 | 15482.0 |
| putative cytoplasmic protein | SAMEA3472108_02934 | Not Available | Positive | 3049427 - 3049699 | 10296.5 |
| zinc-type alcohol dehydrogenase-like protein ydjl | SAMEA3472108_02935 | Not Available | Positive | 3050069 - 3051145 | 38715.9 |
| major facilitator superfamily protein | SAMEA3472108_02936 | Not Available | Positive | 3051172 - 3052551 | 49615.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





