Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein involved in biofilm formation | SAMEA3472108_02897 | Not Available | Negative | 3012914 - 3013162 | 9701.79 |
| regulator of acid resistance, influenced by indole | SAMEA3472108_02898 | Not Available | Negative | 3013274 - 3013540 | 9694.59 |
| protein | SAMEA3472108_02899 | Not Available | Negative | 3013884 - 3014120 | 8694.37 |
| putative signal transduction protein | SAMEA3472108_02900 | Not Available | Positive | 3014434 - 3015645 | 45327.5 |
| merr family transcriptional regulator | SAMEA3472108_02901 | Not Available | Positive | 3015840 - 3016571 | 28236.1 |
| protein | SAMEA3472108_02902 | Not Available | Positive | 3016792 - 3017196 | 15755.9 |
| isocitrate dehydrogenase | SAMEA3472108_02903 | Not Available | Negative | 3018318 - 3019568 | 45772.4 |
| ribosomal large subunit pseudouridine synthase e (rrna pseudouridylate synthase e) | SAMEA3472108_02904 | Not Available | Positive | 3019740 - 3020393 | 24881.8 |
| putative nudix-family hydrolase | SAMEA3472108_02905 | Not Available | Positive | 3020403 - 3020864 | 17424.8 |
| pp_02772 | SAMEA3472108_02906 | Not Available | Positive | 3020918 - 3022024 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





