Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spovr family protein | SAMEA3472108_02876 | Not Available | Positive | 2992936 - 2994468 | 60803.1 |
| fatty acid metabolism regulator protein | SAMEA3472108_02877 | Not Available | Negative | 2994520 - 2995239 | 26970.2 |
| sodium/proton antiporter | SAMEA3472108_02878 | Not Available | Positive | 2995461 - 2997002 | 56731.8 |
| disulfide bond formation protein b | SAMEA3472108_02879 | Not Available | Positive | 2997148 - 2997678 | 20143.3 |
| sos mutagenesis and repair protein | SAMEA3472108_02880 | Not Available | Negative | 2997724 - 2998992 | 47686.4 |
| sos mutagenesis and repair protein | SAMEA3472108_02881 | Not Available | Negative | 2998992 - 2999411 | 15064.2 |
| hemolysin e | SAMEA3472108_02883 | Not Available | Positive | 2999784 - 3000695 | 33733.2 |
| putative cytoplasmic protein ycgn | SAMEA3472108_02884 | Not Available | Negative | 3000902 - 3001348 | 17329.5 |
| putative hydrolase | SAMEA3472108_02885 | Not Available | Negative | 3001440 - 3002099 | 23682.4 |
| putative cytoplasmic protein ycgl | SAMEA3472108_02886 | Not Available | Negative | 3002171 - 3002464 | 11247.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





