Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 1 | SAMEA3472108_02846 | Not Available | Negative | 2956000 - 2957082 | 40519.6 |
| glutamyl-trna reductase | SAMEA3472108_02847 | Not Available | Negative | 2957124 - 2958380 | 46309.5 |
| outer membrane lipoprotein lolb | SAMEA3472108_02848 | Not Available | Positive | 2958594 - 2959217 | 23552.1 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | SAMEA3472108_02849 | Not Available | Positive | 2959217 - 2960068 | 30883.1 |
| ribose-phosphate pyrophosphokinase | SAMEA3472108_02850 | Not Available | Positive | 2960153 - 2961166 | 36651.3 |
| sulfate transporter ychm | SAMEA3472108_02851 | Not Available | Positive | 2961318 - 2962970 | 58388.5 |
| putative membrane protein ychh | SAMEA3472108_02852 | Not Available | Negative | 2963025 - 2963303 | 10486.9 |
| peptidyl-trna hydrolase | SAMEA3472108_02853 | Not Available | Positive | 2963581 - 2964165 | 21083.5 |
| gtp-binding protein | SAMEA3472108_02854 | Not Available | Positive | 2964282 - 2965373 | 39669.6 |
| outer membrane autotransporter | SAMEA3472108_02855 | Not Available | Positive | 2966216 - 2969101 | 100384.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





