Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative acr involved in intracellular sulfur reduction | SAMEA3472108_02834 | Not Available | Positive | 2949029 - 2949382 | 12693.5 |
| cation transport protein chac | SAMEA3472108_02835 | Not Available | Negative | 2949426 - 2950142 | 26571.1 |
| cation transport regulator | SAMEA3472108_02836 | Not Available | Negative | 2950279 - 2950509 | 8945.18 |
| calcium/sodium:proton antiporter | SAMEA3472108_02837 | Not Available | Positive | 2950779 - 2951879 | 39207.9 |
| small toxic polypeptide | SAMEA3472108_02839 | Not Available | Positive | 2952284 - 2952391 | 3971.95 |
| small toxic polypeptide | SAMEA3472108_02841 | Not Available | Positive | 2952820 - 2952927 | 4014.03 |
| 3-deoxy-7-phosphoheptulonate synthase | SAMEA3472108_02842 | Not Available | Negative | 2953075 - 2953929 | 30834.5 |
| protein sirb1 | SAMEA3472108_02843 | Not Available | Negative | 2953965 - 2954774 | 30843.1 |
| transcriptional regulator | SAMEA3472108_02844 | Not Available | Negative | 2954778 - 2955170 | 14625.7 |
| protein methyltransferase hemk (protein-glutamine n methyltransferase) | SAMEA3472108_02845 | Not Available | Negative | 2955167 - 2956000 | 30976.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





