Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-tyr | Not Available | Not Available | Positive | 2935778 - 2935862 | Not Available |
| respiratory nitrate reductase 1 subunit gamma | SAMEA3472108_02825 | Not Available | Negative | 2936224 - 2936901 | 25484.9 |
| respiratory nitrate reductase 1 subunit delta | SAMEA3472108_02826 | Not Available | Negative | 2936901 - 2937611 | 26450.3 |
| respiratory nitrate reductase 1 subunit beta | SAMEA3472108_02827 | Not Available | Negative | 2937608 - 2939146 | 58064.5 |
| respiratory nitrate reductase 1 subunit alpha | SAMEA3472108_02828 | Not Available | Negative | 2939143 - 2942886 | 140452.0 |
| nitrite extrusion protein 1 | SAMEA3472108_02829 | Not Available | Negative | 2943279 - 2944670 | 49696.3 |
| uncharacterised protein | SAMEA3472108_02830 | Not Available | Negative | 2944765 - 2944983 | 8585.29 |
| nitrate/nitrite two-component sensor kinase | SAMEA3472108_02831 | Not Available | Positive | 2945009 - 2946805 | 67088.0 |
| transcriptional regulator narl | SAMEA3472108_02832 | Not Available | Positive | 2946798 - 2947448 | 23928.3 |
| invasin | SAMEA3472108_02833 | Not Available | Negative | 2947449 - 2948879 | 53459.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





