Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marc family integral membrane protein | SAMEA3472108_02813 | Not Available | Negative | 2925038 - 2925685 | 23488.7 |
| bifunctional acetaldehyde-coa/alcohol dehydrogenase | SAMEA3472108_02814 | Not Available | Positive | 2926162 - 2928837 | 96132.5 |
| thymidine kinase | SAMEA3472108_02815 | Not Available | Negative | 2929138 - 2929755 | 23430.9 |
| h-ns histone family protein | SAMEA3472108_02816 | Not Available | Positive | 2930359 - 2930772 | 15540.5 |
| utp--glucose-1-phosphate uridylyltransferase | SAMEA3472108_02817 | Not Available | Negative | 2930916 - 2931824 | 32944.2 |
| orphan two-component response regulator | SAMEA3472108_02818 | Not Available | Negative | 2932026 - 2933039 | 37304.5 |
| patatin | SAMEA3472108_02819 | Not Available | Negative | 2933131 - 2934075 | 34329.6 |
| sec-c motif domain-containing protein | SAMEA3472108_02820 | Not Available | Positive | 2934149 - 2934607 | 17001.3 |
| formyltetrahydrofolate deformylase | SAMEA3472108_02821 | Not Available | Positive | 2934657 - 2935499 | 31922.6 |
| Trna-tyr | Not Available | Not Available | Positive | 2935659 - 2935743 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





