Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voltage-gated potassium channel | SAMEA3472108_02803 | Not Available | Positive | 2915214 - 2916467 | 46108.3 |
| cardiolipin synthetase | SAMEA3472108_02804 | Not Available | Positive | 2916837 - 2918297 | 54825.6 |
| dsdna-mimic protein | SAMEA3472108_02805 | Not Available | Positive | 2918332 - 2918661 | 12687.7 |
| oligopeptide abc transporter atp-binding protein | SAMEA3472108_02806 | Not Available | Negative | 2918714 - 2919718 | 37173.7 |
| oligopeptide abc transporter atp-binding protein | SAMEA3472108_02807 | Not Available | Negative | 2919715 - 2920728 | 37167.7 |
| oligopeptide abc transporter permease | SAMEA3472108_02808 | Not Available | Negative | 2920740 - 2921648 | 33023.9 |
| oligopeptide abc transporter | SAMEA3472108_02809 | Not Available | Negative | 2921663 - 2922583 | 33445.3 |
| periplasmic oligopeptide-binding protein | SAMEA3472108_02810 | Not Available | Negative | 2922669 - 2924345 | 62659.1 |
| uncharacterised protein | SAMEA3472108_02811 | Not Available | Positive | 2924719 - 2924880 | 5849.85 |
| uncharacterised protein | SAMEA3472108_02812 | Not Available | Negative | 2924856 - 2925011 | 5842.45 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





