Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cob(i)yrinic acid a,c-diamide adenosyltransferase | SAMEA3472108_02772 | Not Available | Positive | 2885787 - 2886377 | 22038.2 |
| 23s rrna pseudouridylate synthase b | SAMEA3472108_02773 | Not Available | Negative | 2886417 - 2887289 | 32599.3 |
| putative inner membrane protein | SAMEA3472108_02774 | Not Available | Negative | 2887502 - 2889397 | 71533.5 |
| putative rna binding protein | SAMEA3472108_02775 | Not Available | Negative | 2889425 - 2890045 | 23227.2 |
| putative phosphoesterase | SAMEA3472108_02776 | Not Available | Negative | 2890042 - 2890923 | 32623.8 |
| anthranilate synthase component i | SAMEA3472108_02778 | Not Available | Positive | 2891197 - 2892759 | 57517.7 |
| anthranilate synthase component ii | SAMEA3472108_02779 | Not Available | Positive | 2892759 - 2894354 | 56873.4 |
| tryptophan biosynthesis protein | SAMEA3472108_02780 | Not Available | Positive | 2894358 - 2895716 | 49334.0 |
| tryptophan synthase | SAMEA3472108_02781 | Not Available | Positive | 2895728 - 2896921 | 43013.7 |
| tryptophan synthase alpha chain | SAMEA3472108_02782 | Not Available | Positive | 2896921 - 2897727 | 28706.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





