Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage shock protein operon transcriptional activator | SAMEA3472108_02731 | Not Available | Positive | 2839111 - 2840088 | 37005.7 |
| 4-aminobutyrate aminotransferase | SAMEA3472108_02732 | Not Available | Negative | 2840219 - 2841484 | 44744.7 |
| gamma-glutamylputrescine oxidoreductase | SAMEA3472108_02733 | Not Available | Negative | 2841522 - 2842802 | 47158.2 |
| gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase | SAMEA3472108_02734 | Not Available | Negative | 2842804 - 2844291 | 53447.6 |
| transcriptional regulator of the polyamine metabolism genes | SAMEA3472108_02735 | Not Available | Negative | 2844441 - 2844998 | 20092.8 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase | SAMEA3472108_02736 | Not Available | Negative | 2845025 - 2845789 | 28014.7 |
| glutamine synthetase | SAMEA3472108_02737 | Not Available | Positive | 2846001 - 2847419 | 53180.2 |
| putrescine importer | SAMEA3472108_02738 | Not Available | Positive | 2847722 - 2849107 | 50888.0 |
| protein | SAMEA3472108_02739 | Not Available | Positive | 2849241 - 2849486 | 9307.77 |
| peptide abc transporter, substrate-binding protein | SAMEA3472108_02740 | Not Available | Positive | 2849798 - 2851441 | 61524.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





