Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SAMEA3472108_02617 | Not Available | Positive | 2740735 - 2741076 | 12524.9 |
| inner membrane protein yiaa | SAMEA3472108_02618 | Not Available | Positive | 2741122 - 2741559 | 16123.6 |
| putative membrane-associated acyltransferase | SAMEA3472108_02619 | Not Available | Negative | 2741601 - 2742596 | 37632.1 |
| putative lipoprotein | SAMEA3472108_02620 | Not Available | Positive | 2742771 - 2743070 | 11340.8 |
| glycine trna synthetase | SAMEA3472108_02621 | Not Available | Positive | 2743165 - 2744076 | 34718.2 |
| glycine-trna synthetase, beta subunit | SAMEA3472108_02622 | Not Available | Positive | 2744086 - 2746155 | 76817.2 |
| putative transcriptional regulator | SAMEA3472108_02625 | Not Available | Negative | 2747311 - 2747601 | 11033.5 |
| putative lipoprotein | SAMEA3472108_02626 | Not Available | Positive | 2748035 - 2748745 | 25664.5 |
| 2-ketoaldonate reductase/glyoxylate reductase b | SAMEA3472108_02627 | Not Available | Negative | 2748795 - 2749769 | 35410.5 |
| putative outer membrane protein | SAMEA3472108_02628 | Not Available | Negative | 2749873 - 2750532 | 22198.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





