Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative lipoprotein | SAMEA3472108_02577 | Not Available | Negative | 2694295 - 2694978 | 25519.1 |
| putative cytoplasmic protein | SAMEA3472108_02578 | Not Available | Negative | 2695524 - 2695886 | 13697.8 |
| putative cytoplasmic protein | SAMEA3472108_02579 | Not Available | Positive | 2696171 - 2696380 | 7995.76 |
| mannitol operon repressor | SAMEA3472108_02580 | Not Available | Negative | 2696391 - 2696978 | 22019.4 |
| mannitol-1-phosphate 5-dehydrogenase | SAMEA3472108_02581 | Not Available | Negative | 2696978 - 2698126 | 41126.4 |
| pts system subunit iiabc | SAMEA3472108_02582 | Not Available | Negative | 2698356 - 2700269 | 68004.5 |
| inner membrane protein | SAMEA3472108_02583 | Not Available | Positive | 2700806 - 2701168 | 13894.9 |
| hlyd-family secretion protein | SAMEA3472108_02584 | Not Available | Positive | 2701171 - 2702307 | 41990.8 |
| putative glutathione s-transferase | SAMEA3472108_02585 | Not Available | Positive | 2702378 - 2702986 | 22546.3 |
| l-seryl-trna(ser) selenium transferase | SAMEA3472108_02586 | Not Available | Positive | 2703084 - 2704475 | 50724.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





