Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid a-core:surface polymer ligase waal | SAMEA3472108_02557 | Not Available | Positive | 2669287 - 2670540 | 46791.4 |
| lipopolysaccharide heptosyltransferase 1 | SAMEA3472108_02558 | Not Available | Negative | 2670610 - 2671590 | 36238.5 |
| adp-heptose--lps-heptosyltransferase ii | SAMEA3472108_02559 | Not Available | Negative | 2671594 - 2672640 | 39016.4 |
| adp-glyceromanno-heptose 6-epimerase rfad | SAMEA3472108_02560 | Not Available | Negative | 2672650 - 2673582 | 34896.0 |
| 2-amino-3-ketobutyrate coenzyme a ligase | SAMEA3472108_02561 | Not Available | Positive | 2673796 - 2674992 | 43119.5 |
| threonine 3-dehydrogenase nad(p)-binding protein | SAMEA3472108_02562 | Not Available | Positive | 2675002 - 2676027 | 37257.3 |
| putative glycosyl transferase | SAMEA3472108_02563 | Not Available | Positive | 2676266 - 2677300 | 40456.5 |
| putative polysaccharide deacetylase | SAMEA3472108_02564 | Not Available | Negative | 2677287 - 2678246 | 35396.8 |
| membrane protein yibp | SAMEA3472108_02565 | Not Available | Negative | 2678250 - 2679509 | 46597.4 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | SAMEA3472108_02566 | Not Available | Negative | 2679543 - 2681087 | 56201.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





