Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative alpha helix protein | SAMEA3472108_02536 | Not Available | Negative | 2651994 - 2652857 | 33190.9 |
| ribonuclease ph | SAMEA3472108_02537 | Not Available | Positive | 2652984 - 2653700 | 25313.4 |
| orotate phosphoribosyltransferase | SAMEA3472108_02538 | Not Available | Positive | 2653766 - 2654407 | 23568.3 |
| nucleoid occlusion protein | SAMEA3472108_02539 | Not Available | Negative | 2654444 - 2655040 | 22837.7 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | SAMEA3472108_02540 | Not Available | Negative | 2655147 - 2655605 | 16288.7 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase | SAMEA3472108_02541 | Not Available | Negative | 2655583 - 2656803 | 43472.6 |
| dna repair protein radc | SAMEA3472108_02542 | Not Available | Positive | 2656975 - 2657643 | 25259.9 |
| 50s ribosomal protein l28 | SAMEA3472108_02543 | Not Available | Positive | 2657860 - 2658096 | 9007.02 |
| 50s ribosomal protein l33 | SAMEA3472108_02544 | Not Available | Positive | 2658117 - 2658284 | 6371.94 |
| formamidopyrimidine-dna glycosylase | SAMEA3472108_02545 | Not Available | Positive | 2658382 - 2659191 | 30244.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





