Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium/glutamate symport carrier protein (glutamate permease) | SAMEA3472108_02526 | Not Available | Positive | 2640863 - 2642068 | 42427.9 |
| atp-dependent dna helicase recg | SAMEA3472108_02527 | Not Available | Negative | 2642244 - 2644325 | 76502.2 |
| trna (guanosine-2'-o)-methyltransferase | SAMEA3472108_02528 | Not Available | Negative | 2644331 - 2645020 | 25373.6 |
| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | SAMEA3472108_02529 | Not Available | Negative | 2645027 - 2647135 | 79360.1 |
| rna polymerase omega subunit | SAMEA3472108_02530 | Not Available | Negative | 2647154 - 2647429 | 10237.2 |
| guanylate kinase | SAMEA3472108_02531 | Not Available | Negative | 2647484 - 2648107 | 23594.1 |
| nad-dependent dna ligase ligb | SAMEA3472108_02532 | Not Available | Positive | 2648365 - 2650047 | 63304.1 |
| inner membrane protein | SAMEA3472108_02533 | Not Available | Negative | 2650044 - 2650661 | 22049.8 |
| dna-damage-inducible protein d | SAMEA3472108_02534 | Not Available | Negative | 2650952 - 2651185 | 8543.14 |
| dna-damage-inducible protein d | SAMEA3472108_02535 | Not Available | Negative | 2651502 - 2651774 | 10414.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





