Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transport protein | SAMEA3472108_02516 | Not Available | Negative | 2629031 - 2629324 | 11049.3 |
| lipoprotein-28 | SAMEA3472108_02517 | Not Available | Positive | 2629535 - 2630353 | 29395.2 |
| transport protein yicl | SAMEA3472108_02518 | Not Available | Negative | 2630357 - 2631280 | 33115.4 |
| sugar efflux transporter c | SAMEA3472108_02519 | Not Available | Negative | 2631391 - 2632575 | 43480.0 |
| putative rhum-like cytoplasmic protein | SAMEA3472108_02520 | Not Available | Negative | 2632957 - 2633103 | 5507.7 |
| Trna-sec(p) | Not Available | Not Available | Positive | 2633216 - 2633306 | Not Available |
| putative carbohydrate transporter | SAMEA3472108_02522 | Not Available | Positive | 2633599 - 2634981 | 50965.5 |
| putative glycosyl hydrolase | SAMEA3472108_02523 | Not Available | Positive | 2634991 - 2637309 | 87989.9 |
| asma family protein | SAMEA3472108_02524 | Not Available | Negative | 2637362 - 2639071 | 62169.7 |
| purine permease yice | SAMEA3472108_02525 | Not Available | Negative | 2639192 - 2640583 | 48871.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





