Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative regulatory protein | SAMEA3472108_02506 | Not Available | Negative | 2608880 - 2609203 | 11652.2 |
| uncharacterized protein conserved in bacteria | SAMEA3472108_02507 | Not Available | Negative | 2609187 - 2609546 | 13711.5 |
| ribonucleoside transporter | SAMEA3472108_02508 | Not Available | Positive | 2609726 - 2610958 | 43413.5 |
| putative invasin | SAMEA3472108_02509 | Not Available | Positive | 2611161 - 2621696 | 365845.0 |
| transcriptional regulator | SAMEA3472108_02510 | Not Available | Negative | 2621746 - 2623443 | 63958.9 |
| putative cell invasion type iii effector protein | SAMEA3472108_02511 | Not Available | Negative | 2623646 - 2624995 | 50102.9 |
| putative type iii effector protein | SAMEA3472108_02512 | Not Available | Negative | 2625039 - 2626190 | 43542.2 |
| putative cell invasion type iii effector protein | SAMEA3472108_02513 | Not Available | Negative | 2626203 - 2627984 | 63999.3 |
| uncharacterised protein | SAMEA3472108_02514 | Not Available | Negative | 2628040 - 2628222 | 6965.19 |
| type iii secretion-associated chaperone | SAMEA3472108_02515 | Not Available | Negative | 2628232 - 2628729 | 19070.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





