Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane porin | SAMEA3472108_02496 | Not Available | Negative | 2598549 - 2599928 | 50564.7 |
| chitobiose/cellobiose phosphotransferase enzyme iia component | SAMEA3472108_02497 | Not Available | Negative | 2600128 - 2600430 | 11388.7 |
| glycosyl phosphatase | SAMEA3472108_02498 | Not Available | Negative | 2600427 - 2601824 | 53794.2 |
| pts system cellobiose/chitosan transporter subunit iic | SAMEA3472108_02499 | Not Available | Negative | 2601845 - 2603176 | 48311.3 |
| pts system cellobiose/chitosan transporter subunit iib | SAMEA3472108_02500 | Not Available | Negative | 2603189 - 2603503 | 11428.2 |
| laci family transcriptional regulator | SAMEA3472108_02501 | Not Available | Positive | 2603759 - 2604751 | 36488.1 |
| putative transport protein | SAMEA3472108_02502 | Not Available | Negative | 2604788 - 2604904 | 4455.15 |
| adenine deaminase | SAMEA3472108_02503 | Not Available | Negative | 2604984 - 2606750 | 63690.1 |
| putative permease | SAMEA3472108_02504 | Not Available | Positive | 2606925 - 2608259 | 47012.6 |
| protein of uncharacterised function (duf1198) | SAMEA3472108_02505 | Not Available | Positive | 2608312 - 2608764 | 17220.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





