Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-ribose high-affinity transporter | SAMEA3472108_02413 | Not Available | Negative | 2503699 - 2504118 | 15284.4 |
| kup system potassium uptake protein | SAMEA3472108_02414 | Not Available | Negative | 2504285 - 2506153 | 69256.2 |
| regulatory atpase rava | SAMEA3472108_02415 | Not Available | Positive | 2506376 - 2507872 | 56447.1 |
| protein viaa (vwa domain protein interacting with aaa atpase) | SAMEA3472108_02416 | Not Available | Positive | 2507866 - 2509317 | 55868.5 |
| aspartate--ammonia ligase (asparagine synthetase a) | SAMEA3472108_02417 | Not Available | Negative | 2509322 - 2510314 | 36651.6 |
| regulatory protein asnc | SAMEA3472108_02418 | Not Available | Positive | 2510466 - 2510924 | 16888.7 |
| flavoprotein | SAMEA3472108_02419 | Not Available | Positive | 2511014 - 2511457 | 15824.5 |
| glucose-inhibited division protein a | SAMEA3472108_02420 | Not Available | Positive | 2511836 - 2513725 | 69525.4 |
| glucose inhibited division protein | SAMEA3472108_02421 | Not Available | Positive | 2513789 - 2514412 | 23432.5 |
| f0f1 atp synthase subunit i | SAMEA3472108_02422 | Not Available | Positive | 2515029 - 2515409 | 13618.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





