Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | SAMEA3472108_02319 | Not Available | Negative | 2428967 - 2429662 | 25795.7 |
| protein involved in stress resistance and biofilm formation | SAMEA3472108_02320 | Not Available | Positive | 2429840 - 2430097 | 8815.55 |
| putative peptidoglycan-binding protein | SAMEA3472108_02321 | Not Available | Negative | 2430180 - 2431139 | 34489.7 |
| transcription-repair coupling factor | SAMEA3472108_02322 | Not Available | Negative | 2431286 - 2434780 | 131805.0 |
| putative acyltransferase | SAMEA3472108_02323 | Not Available | Negative | 2434860 - 2435933 | 40869.9 |
| outer membrane-specific lipoprotein transporter subunit lolc | SAMEA3472108_02324 | Not Available | Positive | 2436195 - 2437394 | 43266.5 |
| lipoprotein transporter atp-binding subunit | SAMEA3472108_02325 | Not Available | Positive | 2437387 - 2438088 | 25453.9 |
| lipoprotein-releasing system transmembrane protein | SAMEA3472108_02326 | Not Available | Positive | 2438094 - 2439332 | 45158.7 |
| n-acetyl-d-glucosamine kinase | SAMEA3472108_02327 | Not Available | Positive | 2439361 - 2440272 | 33082.6 |
| nad-dependent deacetylase | SAMEA3472108_02328 | Not Available | Positive | 2440288 - 2441109 | 30938.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





