Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-acp synthase | SAMEA3472108_02299 | Not Available | Positive | 2409520 - 2410473 | 33517.0 |
| malonyl coa-acyl carrier protein transacylase | SAMEA3472108_02300 | Not Available | Positive | 2410489 - 2411418 | 32419.0 |
| 3-oxoacyl-acp reductase | SAMEA3472108_02301 | Not Available | Positive | 2411431 - 2412165 | 25561.9 |
| acyl carrier protein | SAMEA3472108_02302 | Not Available | Positive | 2412376 - 2412612 | 8630.98 |
| 3-oxoacyl-acp synthase | SAMEA3472108_02303 | Not Available | Positive | 2412700 - 2413941 | 43048.3 |
| 4-amino-4-deoxychorismate lyase | SAMEA3472108_02304 | Not Available | Positive | 2414061 - 2414870 | 29799.9 |
| putative aminodeoxychorismate lyase | SAMEA3472108_02305 | Not Available | Positive | 2414873 - 2415895 | 38275.6 |
| thymidylate kinase | SAMEA3472108_02306 | Not Available | Positive | 2415885 - 2416526 | 23784.6 |
| dna polymerase iii subunit delta' | SAMEA3472108_02307 | Not Available | Positive | 2416523 - 2417527 | 37010.7 |
| metallodependent hydrolase | SAMEA3472108_02308 | Not Available | Positive | 2417538 - 2418335 | 29810.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





