Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal body l-ring protein | SAMEA3472108_02287 | Not Available | Positive | 2396326 - 2397024 | 24616.9 |
| flagellar p-ring protein | SAMEA3472108_02288 | Not Available | Positive | 2397036 - 2398133 | 38190.0 |
| muramidase (flagellum-specific) | SAMEA3472108_02289 | Not Available | Positive | 2398133 - 2399074 | 34480.1 |
| flagellar hook-associated protein 1 | SAMEA3472108_02290 | Not Available | Positive | 2399140 - 2400783 | 57875.1 |
| flagellar hook-associated protein 3 | SAMEA3472108_02291 | Not Available | Positive | 2400795 - 2401748 | 34250.9 |
| ribonuclease e | SAMEA3472108_02292 | Not Available | Negative | 2401943 - 2405128 | 118269.0 |
| 23s rrna pseudouridylate synthase c | SAMEA3472108_02294 | Not Available | Positive | 2405701 - 2406660 | 36014.7 |
| conserved protein, duf177 family | SAMEA3472108_02296 | Not Available | Positive | 2407555 - 2408076 | 19314.9 |
| 50s ribosomal protein l32 | SAMEA3472108_02297 | Not Available | Positive | 2408128 - 2408301 | 6446.77 |
| glycerol-3-phosphate acyltransferase plsx | SAMEA3472108_02298 | Not Available | Positive | 2408412 - 2409452 | 37112.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





