Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472108_02237 | Not Available | Positive | 2353875 - 2354663 | 30615.7 |
| uncharacterised protein | SAMEA3472108_02238 | Not Available | Positive | 2354660 - 2356048 | 51392.7 |
| malonyl coa-acyl carrier protein transacylase | SAMEA3472108_02239 | Not Available | Positive | 2356062 - 2357003 | 34245.4 |
| inner membrane protein | SAMEA3472108_02240 | Not Available | Positive | 2357000 - 2357986 | 38671.6 |
| Trna-ser | Not Available | Not Available | Positive | 2358360 - 2358447 | Not Available |
| dehydrogenase | SAMEA3472108_02242 | Not Available | Positive | 2358681 - 2359619 | 35325.4 |
| putative phosphoesterase | SAMEA3472108_02243 | Not Available | Positive | 2359674 - 2360411 | 26833.9 |
| putative chaperone | SAMEA3472108_02244 | Not Available | Positive | 2360435 - 2360989 | 20782.4 |
| inner membrane protein ycdz | SAMEA3472108_02245 | Not Available | Positive | 2361061 - 2361582 | 18111.8 |
| curli production assembly/transport component | SAMEA3472108_02246 | Not Available | Negative | 2361646 - 2362479 | 30559.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





