Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short chain dehydrogenase/reductase family oxidoreductase | SAMEA3472108_02227 | Not Available | Positive | 2343575 - 2344336 | 27204.2 |
| fatty acyl chain dehydrase | SAMEA3472108_02228 | Not Available | Positive | 2344340 - 2344888 | 20926.3 |
| acyl carrier protein | SAMEA3472108_02229 | Not Available | Positive | 2344910 - 2345191 | 10598.6 |
| aminomethyltransferase | SAMEA3472108_02230 | Not Available | Positive | 2345227 - 2346387 | 43486.6 |
| beta-ketoacyl synthase domain-containing protein | SAMEA3472108_02231 | Not Available | Positive | 2346461 - 2349019 | 92207.5 |
| beta-ketoacyl synthase domain-containing protein | SAMEA3472108_02232 | Not Available | Positive | 2349024 - 2350247 | 44098.4 |
| uncharacterised protein | SAMEA3472108_02233 | Not Available | Positive | 2350244 - 2351197 | 36279.4 |
| lipoprotein-releasing system atp-binding protein lold | SAMEA3472108_02234 | Not Available | Positive | 2351208 - 2351915 | 25322.7 |
| uncharacterised protein | SAMEA3472108_02235 | Not Available | Positive | 2351899 - 2352555 | 24434.4 |
| efflux abc transporter permease | SAMEA3472108_02236 | Not Available | Positive | 2352556 - 2353866 | 48077.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





