Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative peroxidase | SAMEA3472108_02207 | Not Available | Positive | 2314049 - 2315320 | 46713.8 |
| protein phoh (phosphate starvation-inducible protein) | SAMEA3472108_02208 | Not Available | Positive | 2315665 - 2316729 | 39297.1 |
| pga biosynthesis protein | SAMEA3472108_02209 | Not Available | Negative | 2316779 - 2317192 | 16082.7 |
| n-glycosyltransferase | SAMEA3472108_02210 | Not Available | Negative | 2317194 - 2318519 | 50796.7 |
| lipoprotein ycdr | SAMEA3472108_02211 | Not Available | Negative | 2318512 - 2320530 | 77447.0 |
| outer membrane protein pgaa | SAMEA3472108_02212 | Not Available | Negative | 2320539 - 2322962 | 92329.0 |
| putative diguanylate cyclase | SAMEA3472108_02213 | Not Available | Positive | 2323551 - 2324909 | 51774.6 |
| rtn-like protein | SAMEA3472108_02214 | Not Available | Positive | 2325007 - 2326617 | 60716.1 |
| fidl-like protein | SAMEA3472108_02215 | Not Available | Negative | 2326719 - 2327210 | 19014.6 |
| transcriptional regulator | SAMEA3472108_02216 | Not Available | Negative | 2327215 - 2328027 | 30946.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





