Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome bd-ii oxidase subunit 2 | SAMEA3472108_02166 | Not Available | Positive | 2268807 - 2269943 | 42426.3 |
| small predicted membrane protein | SAMEA3472108_02167 | Not Available | Positive | 2269956 - 2270048 | 3597.68 |
| periplasmic appa protein | SAMEA3472108_02168 | Not Available | Positive | 2270124 - 2271422 | 47032.4 |
| cryptic autophosphorylating protein tyrosine kinase etk | SAMEA3472108_02169 | Not Available | Negative | 2271542 - 2273722 | 81220.5 |
| phosphotyrosine-protein phosphatase | SAMEA3472108_02170 | Not Available | Negative | 2273742 - 2274188 | 16386.9 |
| polysaccharide export protein | SAMEA3472108_02171 | Not Available | Negative | 2274176 - 2275315 | 41743.2 |
| putative lipoprotein | SAMEA3472108_02172 | Not Available | Negative | 2275361 - 2277457 | 78733.3 |
| group 4 capsule (g4c) polysaccharide, ymcb | SAMEA3472108_02173 | Not Available | Negative | 2277457 - 2278203 | 27278.6 |
| outer membrane lipoprotein | SAMEA3472108_02174 | Not Available | Negative | 2278200 - 2278844 | 24249.9 |
| inner membrane protein | SAMEA3472108_02175 | Not Available | Negative | 2278951 - 2279256 | 9447.98 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





