Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | SAMEA3472108_02136 | Not Available | Positive | 2239464 - 2241371 | 72084.1 |
| paraquat-inducible protein a | SAMEA3472108_02137 | Not Available | Positive | 2241501 - 2242754 | 46466.2 |
| paraquat-inducible protein b | SAMEA3472108_02138 | Not Available | Positive | 2242759 - 2244399 | 60527.1 |
| putative lipoprotein | SAMEA3472108_02139 | Not Available | Positive | 2244396 - 2244959 | 20604.6 |
| ribosome modulation factor | SAMEA3472108_02140 | Not Available | Positive | 2245215 - 2245382 | 6507.88 |
| 3-hydroxydecanoyl-acp dehydratase | SAMEA3472108_02141 | Not Available | Negative | 2245452 - 2246078 | 23066.3 |
| protease la | SAMEA3472108_02142 | Not Available | Negative | 2246039 - 2247799 | 65826.4 |
| putative dehydrogenase | SAMEA3472108_02143 | Not Available | Positive | 2247985 - 2248437 | 17694.4 |
| outer membrane protein a | SAMEA3472108_02144 | Not Available | Negative | 2248513 - 2249565 | 37453.1 |
| sos cell division inhibitor | SAMEA3472108_02145 | Not Available | Negative | 2249922 - 2250431 | 18812.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





