Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic pilin chaperone | SAMEA3472108_02126 | Not Available | Positive | 2227991 - 2228692 | 25424.9 |
| outer membrane export usher protein | SAMEA3472108_02127 | Not Available | Positive | 2228717 - 2231317 | 95413.3 |
| fimbrial-like adhesin protein | SAMEA3472108_02128 | Not Available | Positive | 2231308 - 2232378 | 37921.8 |
| fimbrial-like adhesin protein | SAMEA3472108_02129 | Not Available | Positive | 2232390 - 2232932 | 18914.7 |
| fimbrial protein | SAMEA3472108_02130 | Not Available | Positive | 2232892 - 2233455 | 20345.3 |
| pili assembly chaperone | SAMEA3472108_02131 | Not Available | Positive | 2233469 - 2234158 | 24940.2 |
| dihydroorotate dehydrogenase 2 | SAMEA3472108_02132 | Not Available | Positive | 2234269 - 2235279 | 36776.8 |
| protein | SAMEA3472108_02133 | Not Available | Positive | 2235453 - 2235995 | 20566.8 |
| putative 2fe-2s iron-sulfur cluster binding protein | SAMEA3472108_02134 | Not Available | Negative | 2235992 - 2236942 | 34761.3 |
| putative rna methylase | SAMEA3472108_02135 | Not Available | Positive | 2237344 - 2239452 | 78828.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





