Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stress-induced protein, kgg, repeat | SAMEA3472108_02064 | Not Available | Negative | 2148643 - 2148825 | 6213.94 |
| methylase | SAMEA3472108_02065 | Not Available | Negative | 2149323 - 2149979 | 24076.8 |
| putative protease | SAMEA3472108_02067 | Not Available | Negative | 2150536 - 2152020 | 55047.1 |
| outer membrane protease | SAMEA3472108_02068 | Not Available | Negative | 2152207 - 2153160 | 35565.1 |
| porin thermoregulatory protein | SAMEA3472108_02069 | Not Available | Negative | 2153673 - 2154434 | 28992.5 |
| uncharacterised protein | SAMEA3472108_02070 | Not Available | Negative | 2154617 - 2155507 | 33047.5 |
| bacteriophage n4 receptor, outer membrane subunit | SAMEA3472108_02071 | Not Available | Negative | 2155508 - 2158480 | 111344.0 |
| bacteriophage n4 adsorption protein b | SAMEA3472108_02072 | Not Available | Negative | 2158467 - 2160704 | 85294.3 |
| sensor kinase cuss | SAMEA3472108_02073 | Not Available | Negative | 2160854 - 2162296 | 53774.2 |
| two-component system response regulator | SAMEA3472108_02074 | Not Available | Negative | 2162286 - 2162969 | 25410.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





