Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial chaperone | SAMEA3472108_02005 | Not Available | Positive | 2099860 - 2100552 | 25487.2 |
| fimbrial outer membrane usher protein | SAMEA3472108_02006 | Not Available | Positive | 2100583 - 2103192 | 96058.6 |
| fimbrial protein | SAMEA3472108_02007 | Not Available | Positive | 2103205 - 2104212 | 36614.0 |
| fimbrial protein | SAMEA3472108_02008 | Not Available | Positive | 2104223 - 2104444 | 8304.88 |
| fimbrial protein | SAMEA3472108_02009 | Not Available | Positive | 2104542 - 2104739 | 6975.18 |
| two component transcriptional regulator, luxr family | SAMEA3472108_02010 | Not Available | Negative | 2104742 - 2105374 | 23664.9 |
| Trna-arg | Not Available | Not Available | Positive | 2105617 - 2105693 | Not Available |
| manganese catalase of prophage | SAMEA3472108_02061 | Not Available | Negative | 2146612 - 2147502 | 32179.9 |
| protein ycie | SAMEA3472108_02062 | Not Available | Negative | 2147521 - 2148027 | 19064.6 |
| ycif protein | SAMEA3472108_02063 | Not Available | Negative | 2148064 - 2148564 | 18485.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





