Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamate kinase | SAMEA3472108_01995 | Not Available | Positive | 2091374 - 2092267 | 31676.0 |
| phosphoribosylaminoimidazole carboxylase atpase subunit | SAMEA3472108_01996 | Not Available | Negative | 2092404 - 2093471 | 39498.4 |
| phosphoribosylaminoimidazole carboxylase catalytic subunit | SAMEA3472108_01997 | Not Available | Negative | 2093468 - 2093977 | 17781.3 |
| udp-2,3-diacylglucosamine hydrolase | SAMEA3472108_01998 | Not Available | Negative | 2094095 - 2094817 | 26895.7 |
| peptidyl-prolyl cis-trans isomerase b | SAMEA3472108_01999 | Not Available | Negative | 2094820 - 2095314 | 18167.6 |
| cysteinyl-trna synthetase | SAMEA3472108_02000 | Not Available | Positive | 2095488 - 2096873 | 52186.9 |
| putative membrane-bound metal-dependent hydrolase | SAMEA3472108_02001 | Not Available | Negative | 2096909 - 2097430 | 19457.4 |
| putative rna-binding protein | SAMEA3472108_02002 | Not Available | Negative | 2097538 - 2097750 | 7389.95 |
| 5,10-methylene-tetrahydrofolate dehydrogenase | SAMEA3472108_02003 | Not Available | Negative | 2097752 - 2098618 | 30957.5 |
| fimbrial-like protein | SAMEA3472108_02004 | Not Available | Positive | 2099098 - 2099640 | 18475.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





