Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multifunctional acyl-coa thioesterase i/protease i/lysophospholipase l1 | SAMEA3472108_01974 | Not Available | Negative | 2066462 - 2067055 | 22163.7 |
| abc transporter atp-binding protein | SAMEA3472108_01975 | Not Available | Positive | 2067056 - 2067742 | 24490.5 |
| putative permease | SAMEA3472108_01976 | Not Available | Positive | 2067739 - 2070153 | 89248.5 |
| trna 2-selenouridine synthase | SAMEA3472108_01977 | Not Available | Negative | 2071067 - 2072161 | 41018.1 |
| lysr family transcriptional regulator | SAMEA3472108_01978 | Not Available | Negative | 2072230 - 2073156 | 34598.7 |
| ureidoglycolate hydrolase | SAMEA3472108_01979 | Not Available | Positive | 2073386 - 2073868 | 18237.7 |
| negative regulator of allantoin and glyoxylate utilization operons | SAMEA3472108_01980 | Not Available | Positive | 2073946 - 2074761 | 29271.4 |
| glyoxylate carboligase (tartronate-semialdehyde synthase) | SAMEA3472108_01981 | Not Available | Positive | 2074851 - 2076632 | 64764.5 |
| hydroxypyruvate isomerase | SAMEA3472108_01982 | Not Available | Positive | 2076645 - 2077421 | 29370.1 |
| 2-hydroxy-3-oxopropionate reductase | SAMEA3472108_01983 | Not Available | Positive | 2077521 - 2078399 | 30813.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





