Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472108_01964 | Not Available | Negative | 2058431 - 2058634 | 7500.42 |
| putative lipoprotein | SAMEA3472108_01965 | Not Available | Negative | 2058631 - 2059053 | 15245.2 |
| putative adhesin/invasin-like protein | SAMEA3472108_01966 | Not Available | Negative | 2059154 - 2060893 | 61258.9 |
| uncharacterised protein | SAMEA3472108_01967 | Not Available | Positive | 2061259 - 2061621 | 14184.0 |
| nodulation efficiency family protein | SAMEA3472108_01968 | Not Available | Negative | 2061724 - 2062182 | 16926.0 |
| protease, membrane anchored | SAMEA3472108_01969 | Not Available | Negative | 2062179 - 2063096 | 33745.1 |
| abc transporter atp-binding protein ybbl | SAMEA3472108_01970 | Not Available | Positive | 2063242 - 2063919 | 25383.5 |
| metal resistance protein | SAMEA3472108_01971 | Not Available | Positive | 2063906 - 2064685 | 28166.5 |
| thioredoxin-like protein | SAMEA3472108_01972 | Not Available | Negative | 2064748 - 2065602 | 31762.9 |
| putative oxidoreductase with nad(p)-binding rossmann-fold domain | SAMEA3472108_01973 | Not Available | Negative | 2065663 - 2066433 | 28001.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





