Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ybak containing prolyl-trna synthetase associated domain | SAMEA3472108_01953 | Not Available | Negative | 2024734 - 2025213 | 17083.9 |
| xre family plasmid maintenance system antidote protein | SAMEA3472108_01955 | Not Available | Positive | 2026295 - 2026690 | 15251.5 |
| copper-transporting p-type atpase | SAMEA3472108_01956 | Not Available | Negative | 2027107 - 2029611 | 88037.5 |
| glutaminase 1 | SAMEA3472108_01957 | Not Available | Positive | 2029873 - 2030805 | 32847.1 |
| putative amino acid permease | SAMEA3472108_01958 | Not Available | Positive | 2030808 - 2032100 | 45617.5 |
| putative type i secretion protein | SAMEA3472108_01959 | Not Available | Positive | 2032438 - 2033793 | 49220.8 |
| adhesin for cattle intestine colonization | SAMEA3472108_01960 | Not Available | Positive | 2033896 - 2054685 | 689650.0 |
| type i secretion system, atp-binding protein | SAMEA3472108_01961 | Not Available | Positive | 2054689 - 2056851 | 80642.6 |
| type i secretion system protein | SAMEA3472108_01962 | Not Available | Positive | 2056848 - 2058023 | 43647.4 |
| dna-binding transcriptional regulator cuer | SAMEA3472108_01963 | Not Available | Positive | 2058020 - 2058427 | 15263.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





