Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome o ubiquinol oxidase subunit iii | SAMEA3472108_01899 | Not Available | Negative | 1966285 - 1966899 | 22624.0 |
| cytochrome o ubiquinol oxidase subunit i | SAMEA3472108_01900 | Not Available | Negative | 1966889 - 1968880 | 74372.2 |
| cytochrome o ubiquinol oxidase subunit ii | SAMEA3472108_01901 | Not Available | Negative | 1968902 - 1969849 | 34899.1 |
| peptidoglycan monomer (n-acetylglucosamine-1,6-anhydro-n-acetylmuramic acid-tetrapeptide) uptake protein (major facilitator superfamily protein) | SAMEA3472108_01902 | Not Available | Negative | 1970309 - 1971784 | 53280.4 |
| lipoprotein yajg precursor | SAMEA3472108_01903 | Not Available | Negative | 1971828 - 1972406 | 20951.3 |
| putative transcriptional regulator | SAMEA3472108_01904 | Not Available | Positive | 1972714 - 1973028 | 11863.1 |
| trigger factor | SAMEA3472108_01905 | Not Available | Positive | 1973372 - 1974670 | 48195.4 |
| atp-dependent clp protease proteolytic subunit | SAMEA3472108_01906 | Not Available | Positive | 1974916 - 1975539 | 23188.1 |
| atp-dependent specificity component of clpp serine protease | SAMEA3472108_01907 | Not Available | Positive | 1975665 - 1976939 | 46358.7 |
| dna-binding atp-dependent protease la | SAMEA3472108_01909 | Not Available | Positive | 1977127 - 1979481 | 87443.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





