Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein phosphodiesterase | SAMEA3472108_01869 | Not Available | Negative | 1938506 - 1939087 | 22917.3 |
| s-adenosylmethionine--trna ribosyltransferase-isomerase | SAMEA3472108_01870 | Not Available | Positive | 1939180 - 1940250 | 39433.0 |
| pp_01778 | SAMEA3472108_01871 | Not Available | Positive | 1940306 - 1941433 | Not Available |
| secyeg protein translocase auxillary subunit | SAMEA3472108_01872 | Not Available | Positive | 1941456 - 1941788 | 11887.9 |
| protein-export protein | SAMEA3472108_01873 | Not Available | Positive | 1941849 - 1943663 | 65171.4 |
| preprotein translocase subunit secf | SAMEA3472108_01874 | Not Available | Positive | 1943674 - 1944645 | 35384.6 |
| putative endonuclease | SAMEA3472108_01875 | Not Available | Positive | 1944774 - 1945121 | 13364.7 |
| nucleoside-specific channel-forming protein tsx | SAMEA3472108_01876 | Not Available | Negative | 1945298 - 1946182 | 33590.6 |
| putative lipoprotein | SAMEA3472108_01877 | Not Available | Negative | 1946481 - 1947020 | 19603.6 |
| putative regulatory protein | SAMEA3472108_01878 | Not Available | Positive | 1947171 - 1947620 | 17229.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





