Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructokinase | SAMEA3472108_01859 | Not Available | Positive | 1922754 - 1923662 | 32511.6 |
| mfs transporter araj | SAMEA3472108_01860 | Not Available | Negative | 1923796 - 1925064 | 44640.5 |
| exonuclease, dsdna, atp-dependent | SAMEA3472108_01861 | Not Available | Negative | 1925106 - 1928249 | 118470.0 |
| exonuclease sbcd | SAMEA3472108_01862 | Not Available | Negative | 1928246 - 1929448 | 44762.2 |
| phosphate regulon two-component system, response regulator | SAMEA3472108_01863 | Not Available | Positive | 1929638 - 1930327 | 26435.0 |
| phosphate regulon two-component system, sensor kinase | SAMEA3472108_01864 | Not Available | Positive | 1930385 - 1931680 | 49645.4 |
| branched chain amino acid transport system ii carrier protein | SAMEA3472108_01865 | Not Available | Positive | 1932087 - 1933406 | 46211.5 |
| proline-specific permease | SAMEA3472108_01866 | Not Available | Positive | 1933482 - 1934855 | 50218.8 |
| maltodextrin glucosidase | SAMEA3472108_01867 | Not Available | Positive | 1935011 - 1936828 | 69235.0 |
| uncharacterised protein | SAMEA3472108_01868 | Not Available | Positive | 1937016 - 1938485 | 56017.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





