Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative signal transduction protein | SAMEA3472108_01849 | Not Available | Positive | 1914007 - 1915122 | 41525.9 |
| pyrroline-5-carboxylate reductase | SAMEA3472108_01850 | Not Available | Negative | 1915139 - 1915948 | 28146.6 |
| putative cytoplasmic protein | SAMEA3472108_01851 | Not Available | Positive | 1916068 - 1916526 | 16984.4 |
| shikimate kinase | SAMEA3472108_01852 | Not Available | Positive | 1916709 - 1917233 | 19151.9 |
| protein | SAMEA3472108_01853 | Not Available | Positive | 1917283 - 1917474 | 7281.55 |
| putative chorismate biosynthesis protein | SAMEA3472108_01854 | Not Available | Positive | 1917732 - 1918409 | 24900.4 |
| conserved protein, upf0345 family | SAMEA3472108_01855 | Not Available | Positive | 1918481 - 1918765 | 10234.9 |
| protein involved in detoxification of methylglyoxal | SAMEA3472108_01856 | Not Available | Positive | 1918909 - 1921188 | 86807.8 |
| uncharacterised protein | SAMEA3472108_01857 | Not Available | Positive | 1921185 - 1921640 | 17800.5 |
| exonuclease rdgc | SAMEA3472108_01858 | Not Available | Negative | 1921718 - 1922695 | 36516.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





