Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative periplasmic ferric iron-binding protein | SAMEA3472108_01829 | Not Available | Negative | 1891878 - 1892909 | 37404.5 |
| putative regulatory protein | SAMEA3472108_01830 | Not Available | Negative | 1892906 - 1894210 | 47923.6 |
| putative sensor histidine protein kinase (uhpb-like) | SAMEA3472108_01831 | Not Available | Negative | 1894295 - 1895836 | 57903.7 |
| putative response regulator | SAMEA3472108_01832 | Not Available | Negative | 1895836 - 1896465 | 22813.6 |
| taurine transporter substrate binding subunit | SAMEA3472108_01833 | Not Available | Positive | 1896768 - 1897730 | 34267.9 |
| taurine abc transporter atp-binding protein | SAMEA3472108_01834 | Not Available | Positive | 1897743 - 1898510 | 28326.6 |
| taurine abc transporter permease | SAMEA3472108_01835 | Not Available | Positive | 1898507 - 1899334 | 29611.6 |
| alpha-ketoglutarate-dependent taurine dioxygenase | SAMEA3472108_01836 | Not Available | Positive | 1899331 - 1900182 | 32354.2 |
| delta-aminolevulinic acid dehydratase | SAMEA3472108_01837 | Not Available | Negative | 1900341 - 1901315 | 35626.8 |
| flagellin structural protein | SAMEA3472108_01838 | Not Available | Positive | 1901840 - 1904722 | 103434.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





