Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-4-pentenoate hydratase | SAMEA3472108_01819 | Not Available | Positive | 1880849 - 1881658 | 28833.4 |
| acetaldehyde dehydrogenase | SAMEA3472108_01820 | Not Available | Positive | 1881655 - 1882605 | 33446.4 |
| 4-hydroxy-2-oxovalerate aldolase | SAMEA3472108_01821 | Not Available | Positive | 1882602 - 1883615 | 36440.6 |
| transport protein | SAMEA3472108_01822 | Not Available | Positive | 1884191 - 1885402 | 41571.4 |
| nucleoprotein/polynucleotide-associated enzyme | SAMEA3472108_01823 | Not Available | Positive | 1885504 - 1886043 | 19923.8 |
| putative esterase | SAMEA3472108_01824 | Not Available | Negative | 1886168 - 1887001 | 31284.9 |
| alcohol dehydrogenase | SAMEA3472108_01825 | Not Available | Negative | 1887094 - 1888203 | 39335.2 |
| regulator protein frmr | SAMEA3472108_01826 | Not Available | Negative | 1888238 - 1888513 | 10318.3 |
| fe(3+) ions import atp-binding protein fbpc | SAMEA3472108_01827 | Not Available | Negative | 1888673 - 1889719 | 39102.0 |
| permease component of transport system for ferric iron | SAMEA3472108_01828 | Not Available | Negative | 1889731 - 1891809 | 75800.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





