Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative xanthine dehydrogenase, molybdenum-binding subunit | SAMEA3472108_01748 | Not Available | Negative | 1795867 - 1798065 | 78085.8 |
| putative xanthine dehydrogenase, fad-binding subunit | SAMEA3472108_01749 | Not Available | Negative | 1798062 - 1799018 | 33829.8 |
| putative xanthine dehydrogenase, iron-sulfur binding subunit | SAMEA3472108_01750 | Not Available | Negative | 1799015 - 1799704 | 24429.2 |
| integral membrane protein | SAMEA3472108_01751 | Not Available | Positive | 1800144 - 1800758 | 22968.1 |
| putative fimbrial protein | SAMEA3472108_01753 | Not Available | Negative | 1801644 - 1802354 | 26650.7 |
| putative fimbrial protein | SAMEA3472108_01754 | Not Available | Negative | 1802323 - 1803966 | 59937.1 |
| putative fimbrial outer membrane usher protein | SAMEA3472108_01755 | Not Available | Negative | 1803956 - 1806481 | 91265.7 |
| putative fimbrial protein | SAMEA3472108_01756 | Not Available | Negative | 1806507 - 1807175 | 24514.4 |
| fimbrillin | SAMEA3472108_01757 | Not Available | Negative | 1807233 - 1807820 | 20112.5 |
| putative fimbrial transcriptional regulator | SAMEA3472108_01758 | Not Available | Negative | 1807895 - 1808437 | 21231.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





