Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter | SAMEA3472108_01705 | Not Available | Positive | 1747858 - 1747953 | 3190.97 |
| maltose transport system, substrate-binding protein | SAMEA3472108_01706 | Not Available | Positive | 1748046 - 1749236 | 43389.9 |
| maltose transporter membrane protein | SAMEA3472108_01707 | Not Available | Positive | 1749390 - 1750934 | 57016.6 |
| maltose transporter permease | SAMEA3472108_01708 | Not Available | Positive | 1750949 - 1751839 | 32227.3 |
| d-xylose transporter xyle | SAMEA3472108_01709 | Not Available | Positive | 1752211 - 1753686 | 53584.1 |
| protein psie | SAMEA3472108_01710 | Not Available | Negative | 1753730 - 1754140 | 15597.7 |
| putative lipoprotein | SAMEA3472108_01711 | Not Available | Negative | 1754735 - 1756831 | 78497.1 |
| group 4 capsule (g4c) polysaccharide, ymcb | SAMEA3472108_01712 | Not Available | Negative | 1756831 - 1757568 | 26315.3 |
| lipoprotein yjbf | SAMEA3472108_01713 | Not Available | Negative | 1757565 - 1758203 | 23783.2 |
| protein | SAMEA3472108_01714 | Not Available | Negative | 1758317 - 1758559 | 7386.46 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





