Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic amino acid aminotransferase | SAMEA3472108_01685 | Not Available | Negative | 1726123 - 1727316 | 43477.1 |
| alanine racemase | SAMEA3472108_01686 | Not Available | Negative | 1727569 - 1728648 | 39197.3 |
| replicative dna helicase | SAMEA3472108_01687 | Not Available | Negative | 1728701 - 1730116 | 52393.1 |
| quinone oxidoreductase, nadph-dependent | SAMEA3472108_01688 | Not Available | Positive | 1730199 - 1731182 | 35202.2 |
| phage shock protein g | SAMEA3472108_01689 | Not Available | Negative | 1731348 - 1731590 | 9024.0 |
| pp_01602 | SAMEA3472108_01690 | Not Available | Negative | 1731724 - 1732761 | Not Available |
| protein of uncharacterised function (duf2713) | SAMEA3472108_01691 | Not Available | Negative | 1733123 - 1733869 | 27965.9 |
| yjbl | SAMEA3472108_01692 | Not Available | Negative | 1733860 - 1734144 | 10925.2 |
| zinc uptake regulation protein | SAMEA3472108_01693 | Not Available | Positive | 1734463 - 1734978 | 19255.2 |
| putative general stress response protein | SAMEA3472108_01694 | Not Available | Negative | 1735020 - 1735229 | 8325.67 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





